A B C D E F G I J K L M N O P R S T U V W

G

Gene - Class in net.sf.amiba.evolve.gene

A gene.

Gene(int, Character[]) - Constructor for class Gene

GeneGrammar<T> - Class in net.sf.amiba.genegrammar

This abstract class represents the grammar that will be used by a genome.

GeneGrammar(List<Character>, Character) - Constructor for class GeneGrammar

generate(int, String) - Static method in class FitnessCaseGenerator

generateParseException() - Method in class ScientificParser

GEPRootNode<T> - Interface in net.sf.amiba.genegrammar

The Amiba interface that should be implemented by the root node of the abstract syntax tree

getAlphabet() - Method in class IndividualFactory

getAlphabet() - Method in class GeneGrammar

getAverageFitness() - Method in class EvolutionResult

getBeginColumn() - Method in class SimpleCharStream

getBeginLine() - Method in class SimpleCharStream

getBestIndividual() - Method in class EvolutionResult

getCalibratedFitness() - Method in class Individual

getChromosomeLength() - Method in class Individual

get the sum of lengths of all genes

getColumn() - Method in class SimpleCharStream

Deprecated.

getDoublePointRate() - Method in class RecombinationEngine

getEndColumn() - Method in class SimpleCharStream

getEndLine() - Method in class SimpleCharStream

getEvolutionResult() - Method in class DefaultPopulation

get the result of the evolution at this point

getEvolutionResult() - Method in interface Population

get the result of the evolution

getFitness() - Method in class Individual

getFitnessCaseLoader() - Method in class AmibaFactory

getFitnessCaseLoader() - Method in class ScientificFactory

getFitnessFunction() - Method in class IndividualFactory

getGeneHeadLength() - Method in class IndividualFactory

getGeneLength() - Method in class Individual

getGeneRate() - Method in class RecombinationEngine

getGenerationNumber() - Method in class DefaultPopulation

getGenerationNumber() - Method in interface Population

getGenes() - Method in class Individual

getGrammar(List<Character>, Character) - Method in class AmibaFactory

getGrammar() - Method in class Individual

getGrammar(List<Character>, Character) - Method in class ScientificFactory

getHeadLength() - Method in class Gene

getHeadLength() - Method in class Individual

GetImage() - Method in class SimpleCharStream

getIndividuals() - Method in class DefaultPopulation

getIndividuals() - Method in interface Population

required to change and manipulate the population

getLength() - Method in class TranspositionEngine.InsertionDescriptor

getLine() - Method in class SimpleCharStream

Deprecated.

getLinkingFunction() - Method in class IndividualFactory

getLinkingFunction() - Method in class GeneGrammar

getMaximumArity() - Method in class GeneGrammar

get the maximum arity among the operators of this grammar

getMaximumArity() - Method in class ScientificGrammar

getMessage() - Method in exception ParseException

This method has the standard behavior when this object has been created using the standard constructors.

getMessage() - Method in error TokenMgrError

You can also modify the body of this method to customize your error messages.

getMutations() - Method in class MutationEngine

getNextToken() - Method in class ScientificParser

getNextToken() - Method in class ScientificParserTokenManager

getNumberOfGenes() - Method in class Individual

getNumberOfGenes() - Method in class IndividualFactory

getOperator() - Method in class SimpleNode

getOperators() - Method in class GeneGrammar

return the operators that are valid for this grammar

getOperators() - Method in class ScientificGrammar

getPercentIndividuals() - Method in class MutationEngine

getPercentIndividuals() - Method in class TranspositionEngine.InsertionDescriptor

getRandomData() - Method in class IndividualFactory

getSequence() - Method in class Gene

getSinglePointRate() - Method in class RecombinationEngine

GetSuffix(int) - Method in class SimpleCharStream

getTabSize(int) - Method in class SimpleCharStream

getTerminal() - Method in class SimpleNode

getTerminals() - Method in class GeneGrammar

getToken(int) - Method in class ScientificParser

getValue() - Method in class FitnessCase

get the expected resultant value for this combination of terminal values

getValueFor(Character) - Method in class FitnessCase

get the value for the specified termianl